Using Software on the OSG
Overview of Software Options
Install Your Own Software
Use Precompiled Binaries and Prebuilt Executables
Use Docker and Singularity Containers
A...
Fri, 20 May, 2022 at 1:10 PM
Requirements
Additional Feature-Specific Attributes
Specifying Sites / Avoiding Sites
By default, your jobs will match any available spot ...
Fri, 20 May, 2022 at 1:10 PM
Compiling Software for OSG Connect
Introduction
Get software source code
Select the appropriate compiler and compilation options
Static versus d...
Fri, 20 May, 2022 at 1:10 PM
Example of Compilng Software For Use In OSG Connect
Introduction
Compile Samtools Without CRAM Support
Step 1. Acquire Samtools source code
Step...
Fri, 20 May, 2022 at 1:10 PM
Exploring Images on the Access Points
OSG-Provided Images
Custom Singularity Images
Custom Docker Images
Using Containers from Non-OSG Connect A...
Fri, 20 May, 2022 at 1:10 PM
Base
Languages
Project
Tools
This is list of commonly used containers in the Open Science Pool. These can be used
directly in your jobs or a...
Fri, 20 May, 2022 at 1:10 PM
Install Docker and Get a Docker Hub Account
Identify Components
Build a Container
Editing the Dockerfile
Editing the default image using local D...
Fri, 20 May, 2022 at 1:10 PM
Introduction
List Available Modules on OSG Connect
How To Use Environment Modules
Use Environment Modules in Jobs
Add module commands to executa...
Fri, 20 May, 2022 at 1:10 PM
A large number of software packages can be used by compiling a portable installation or using a container
(many community sofwares are already available in...
Fri, 20 May, 2022 at 1:10 PM
Install Singularity
Identify Components
Editing the Build Spec
NOTE: Building Singularity containers are currently not supported
on the OS...
Fri, 20 May, 2022 at 1:10 PM