Due to the distributed configuration of the OSG, more often than not, your jobs will need to bring along a copy (i.e. transfer a copy) of data, code, packages, software, etc. to the execute node where the job will run. This requirement applies to any and all files that are needed to successfully execute and complete your job.
This guide will describe steps and important considerations for transferring your files that are >100MB but <1GB using the HTTP file transfer mechanism via the HTCondor submit file.
As described in the Introduction to Data Management on OSG Connect
any data, files, or even software that is >100MB should be staged in your
/public directory on your login node. Files in your
that are <1GB can be transferred with your jobs via HTTP using your HTCondor submit file.
If you have files that are >1GB please see our
Transfer Large Input and Output Files >1GB In Size guide.
Transfer Files From
/public Using HTTP
To transfer files staged in your
/public directory, use an HTTP URL in
combination with the
transfer_input_files statement in your HTCondor submit.
transfer_input_files = http://stash.osgconnect.net/public/username/path/my_software.tar.gz
username refers to your OSG Connect username. Multiple URLs can
be specified using a comma-separated list, and a combination of URLs and
/home directory can be provided in a comma separated list. For example,
transfer_input_files = http://stash.osgconnect.net/public/username/path/my_software.tar.gz, /home/username/my_data.csv
Transfer Files Directly From The Web Using HTTP
Files that are available on the web, and are <1GB in size, can also be
transferred with your jobs via HTTP using
of files that are available on the web that may be needed for your jobs
include precompiled binaries (i.e. software), data in public repositories,
etc. Like the example above, use a URL in comnbination with the
transfer_input_files statement in your HTCondor submit file. For
example, to have a copy of the Blast precompiled binaries transferred
with your jobs you can use:
transfer_input_files = https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.10.0+-x64-linux.tar.gz
Additional Related Links
This page was updated on Nov 24, 2020 at 16:51 from start/data/file-transfer-via-http.md.